SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.09G019800

Alias VAMP721D

Description vesicle-associated membrane protein 721d

Gene interval Chr09:1540660–1547761 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features252Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

252 matching features · page 19 of 26

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P34116 Pyrazosulfuron-ethyl 414.0970 19.251e-11
P34561 No candidate annotation 818.1767 12.586e-11
P34767 (2S)-2-Cyclopentyl-2-[4-[(2,4-dimethylpyrido[2,3-b]indol-9-yl)methyl]phenyl]-N-[(1S)-2-hydroxy-1-phenylethyl]acetamide 531.2973 11.854e-11
P35028 PS(20:5(5Z,8Z,11Z,14Z,17Z)/18:4(6Z,9Z,12Z,15Z)) 801.4653 19.591e-11
P35123 AT 2433B1 644.2478 12.622e-14
P35124 Dictyoquinazol A 312.1117 11.972e-12
P35545 No candidate annotation 616.8018 13.924e-11
P36028 Anachelin 760.3293 14.564e-12
P36433 Myxochromide S2 736.4115 17.539e-11
P37037 Sophorophenolone 298.0465 19.742e-12