Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34767

Metabolite ID
P34767
Deionized mass
531.2973 Da
Average m/z
532.3058
Average RT
17.5187
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
119
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

119 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)6.277e-11
Glyma.06G313500 hypothetical protein NA 3Chr06:50191600–50203098 (-)4.204e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)2.296e-12
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)8.814e-12
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)2.512e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)2.736e-15
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)3.218e-16
Glyma.09G018700 hypothetical protein NA 2Chr09:1470411–1472672 (-)3.38e-12
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)4.733e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)3.253e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)4.588e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.528e-14
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)3.394e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.529e-13
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 2Chr20:34151918–34155417 (+)5.629e-14
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)3.028e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)6.136e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.68e-12
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)4.082e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)4.51e-12
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)3.754e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.515e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.529e-16
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)3.427e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.727e-12
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)2.863e-12
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)8.928e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.507e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.71e-13
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)1.798e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)5.431e-14
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)5.431e-14
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)5.431e-14
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.384e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)3.241e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)6.277e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)6.277e-11
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)1.12e-12
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)2.851e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)8.908e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)4.761e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)2.466e-12
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)2.466e-12
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)3.51e-13
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)7.256e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.842e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)1.152e-12
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)8.235e-13
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)4.287e-12
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)1.184e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)2.71e-17
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)2.469e-14
Glyma.09G019300 hypothetical protein AT1G52520:FRS6:FAR1-related sequence 6 1Chr09:1514278–1517148 (+)1.79e-11
Glyma.09G019800 VAMP721D vesicle-associated membrane protein 721d NA 1Chr09:1540660–1547761 (+)1.854e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)7.73e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.971e-11
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)2.607e-11
Glyma.11G070700 hypothetical protein NA 1Chr11:5282926–5287258 (+)7.739e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)3.161e-12
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)3.161e-12
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)3.161e-12
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)2.994e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.095e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)4.588e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)2.535e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)2.296e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)1.614e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)9.102e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)9.102e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)9.102e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.603e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)3.288e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.186e-12
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)4.984e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)1.294e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)1.294e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)2.663e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.394e-13
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)4.107e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)4.107e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.107e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.586e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.107e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.107e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)6.545e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.047e-16
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)4.49e-11
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)3.785e-12
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)3.615e-12
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)2.232e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.951e-12
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)8.814e-12
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)8.814e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)8.814e-12
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)8.814e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.755e-13
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.493e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)7.54e-14
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.503e-11
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)1.231e-11
Glyma.16G143400 hypothetical protein NA 1Chr16:30337469–30338390 (-)1.789e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.465e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.465e-12
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)6.196e-11
Glyma.16G146700 hypothetical protein NA 1Chr16:30755899–30759360 (-)6.196e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)2.723e-11
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 1Chr17:41280124–41284980 (-)4.071e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)2.93e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)2.93e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.723e-17
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.723e-17
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)8.42e-14
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)8.426e-12
Glyma.20G098200 hypothetical protein AT1G56345:AT1G56345:Pseudouridine synthase family protein 1Chr20:34140611–34141832 (+)1.081e-11
Glyma.20G098500 hypothetical protein AT2G39470:PnsL1:PsbP-like protein 2 1Chr20:34179794–34183432 (-)4.857e-13
Glyma.20G106400 hypothetical protein AT5G23590:AT5G23590:DNAJ heat shock N-terminal domain-containing protein 1Chr20:34888699–34893605 (-)6.603e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)2.089e-11
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)7.637e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)7.073e-11