SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.08G119300

Description hypothetical protein

Gene interval Chr08:9198213–9201688 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G29330:ERD2:ER lumen protein retaining receptor family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features729Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records178

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2455.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

729 matching features · page 57 of 73

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P32148 1-hexadecanoyl-2-(4-hydroxy-7-oxo-5E-heptenoyl)-sn-glycero-3-phospho-(1'-sn-glycerol) 624.3290 13.429e-11
P32150 Samaderine Z 394.1588 18.366e-14
P32245 Neoenactin NL2 386.2734 16.658e-11
P32247 6-Amino-9-benzyl-2-(2-methoxyethoxy)-9H-purin-8-ol 315.1328 17.856e-11
P32289 N-[6-(2,3-Difluorophenyl)-2-oxo-1-(2,2,2-trifluoroethyl)azepan-3-yl]-4-(2-oxo-3H-imidazo[4,5-b]pyridin-1-yl)piperidine-1-carboxamide 566.2069 12.821e-11
P32396 No candidate annotation 142.0818 11.151e-12
P32404 Tetramethylrosamine 390.1506 19.598e-12
P32448 allo-Aromadendrane-10beta,14-diol 238.1913 12.153e-11
P32474 Thymol glucoside 312.1543 18.539e-12
P32485 Dichotosinin 478.1811 16.06e-13