Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32396

Metabolite ID
P32396
Deionized mass
142.0818 Da
Average m/z
143.0895
Average RT
16.6505
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
74
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

74 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)5.432e-13
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.489e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)1.187e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)1.186e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)1.187e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)3.202e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)1.663e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.904e-13
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)3.731e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.116e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.116e-13
Glyma.02G031400 hypothetical protein NA 1Chr02:2899554–2901708 (+)6.465e-15
Glyma.02G033500 hypothetical protein AT1G60140:TPS10:trehalose phosphate synthase__AT1G70290:TPS8:trehalose-6-phosphatase synthase S8__AT1G23870:TPS9:trehal… 1Chr02:3098851–3104217 (-)2.971e-13
Glyma.02G081600 hypothetical protein NA 1Chr02:7054190–7055955 (-)2.169e-11
Glyma.02G081900 hypothetical protein AT1G43650:UMAMIT22:nodulin MtN21 /EamA-like transporter family protein 1Chr02:7075646–7080163 (-)4.593e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.106e-12
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)2.685e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)6.854e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)8.477e-11
Glyma.05G131100 hypothetical protein AT5G60620:GPAT9:glycerol-3-phosphate acyltransferase 9 1Chr05:32411641–32419257 (+)1.388e-13
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)1.388e-13
Glyma.05G131500 hypothetical protein AT5G44800:CHR4:chromatin remodeling 4 1Chr05:32446303–32473428 (+)1.515e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)4.842e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)7.222e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.504e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.78e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.889e-12
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)5.056e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.595e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)1.151e-12
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)3.53e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.489e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.489e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.489e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)3.78e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.009e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.754e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)9.476e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)1.187e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)1.187e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)1.187e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)1.187e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)1.187e-11
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)3.683e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.403e-11
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)5.498e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)5.165e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)5.165e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)4.171e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)4.171e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)7.194e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.663e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.555e-13
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.555e-13
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.555e-13
Glyma.13G353500 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit__AT1G51980:AT1G51980:Insulinase (Peptidase family M… 1Chr13:44204963–44209251 (+)8.864e-13
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)1.368e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.082e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.887e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)5.039e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.582e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.197e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.587e-11
Glyma.16G145500 hypothetical protein AT2G39200:MLO12:Seven transmembrane MLO family protein 1Chr16:30630177–30636253 (+)7.395e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)3.731e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)8.929e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)8.929e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)1.915e-13
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)3.123e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)7.293e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)7.293e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.01e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.01e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)9.876e-11