SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.08G117100

Description hypothetical protein

Gene interval Chr08:9032236–9036159 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G34190:AT2G34190:Xanthine/uracil permease family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features170Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

170 matching features · page 11 of 17

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P32453 Gephyronic acid 488.3342 17.768e-11
P32474 Thymol glucoside 312.1543 17.296e-12
P32516 No candidate annotation 709.3857 11.57e-12
P32748 R-30-hydroxygambogic acid 644.3018 13.859e-11
P32784 (3S)-7-Hydroxy-8,2',3',4',5'-pentamethoxyisoflavan 376.1503 11.82e-12
P32815 No candidate annotation 826.3427 13.906e-12
P33291 Pseudouridine 244.0704 11.669e-11
P33665 Validamycin A 497.2114 12.372e-11
P33841 Shatavarin X 928.5040 18.369e-11
P33868 No candidate annotation 420.3347 14.202e-11