SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.08G114200

Description hypothetical protein

Gene interval Chr08:8743328–8745667 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G08810:SUB1:calcium ion binding protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features29Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records6

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2069.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

29 matching features · page 1 of 3

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01795 benserazide 257.0969 25.454e-14
P05523 (S)-3-Ethylidenehexahydropyrrolo[1,2-a]pyrazine-1,4-dione 180.0880 24.4e-13
P32359 Codonopyrrolidium B 267.1489 21.327e-14
P38374 Cilistol pm 668.3788 21.943e-12
P42556 Arboreaside B 1104.5548 23.744e-11
P47544 Ancorinoside C 861.4698 28e-13
P00589 Lykurim 364.0967 17.759e-12
P01205 No candidate annotation 600.0451 18.868e-11
P01724 Lactulose 342.1143 16.698e-11
P08379 2S-(6,12-dichloro-dodecanoyloxy)-propanoic acid 340.1236 11.676e-11