SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G100400

Description hypothetical protein

Gene interval Chr07:9523110–9526319 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G18050:AT3G18050:GPI-anchored protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features596Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records193

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4748.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

596 matching features · page 11 of 60

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P14765 Pamatolol 310.1852 26.877e-13
P14846 2,3-Dihydro-1H-pyrrolizine-5-carboxaldehyde 135.0667 21.637e-11
P15523 N-Propylamphetamine 177.1505 23e-11
P15527 (1S,4R)-passicapsin 417.1645 28.077e-15
P16929 trans-Crocetin (beta-D-glucosyl) (beta-D-gentibiosyl) ester 814.3260 21.746e-11
P17515 No candidate annotation 166.1071 21.645e-17
P17580 Swietenidin B 205.0721 29.727e-14
P18019 AH 135Y 291.1104 23.023e-19
P18355 Methyl 6-(4-isopropyl-4-methyl-5-oxo-2-imidazolin-2-yl)-m-toluate 288.1451 22.007e-14
P18539 5-Methoxy-8,8-dimethyl-10-(3',7'-dimethylocta-1',6'-dien-3'-yl)-2H,8H,benzo[1,2-b:5,4-b']dipyran-2-one 394.2146 21.922e-12