SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G074800

Description hypothetical protein

Gene interval Chr07:6806841–6815545 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G16840:AT3G16840:P-loop containing nucleoside triphosphate hydrolases superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features38Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0789.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

38 matching features · page 2 of 4

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P19622 Chakaflavonoside A 1064.3162 11.903e-11
P21096 No candidate annotation 497.1108 11.977e-12
P21701 Acemetacin 415.0827 19.424e-13
P22417 No candidate annotation 613.6280 19.005e-11
P22997 No candidate annotation 850.2201 11.187e-11
P24826 Actinoplanone G 618.1737 17.779e-11
P26792 2-Methoxybenzoic acid 152.0462 19.361e-12
P26852 No candidate annotation 856.9039 16.518e-11
P27334 Histidine glutamate 300.1071 16.898e-12
P29315 Leucasperoside A 788.3804 11.005e-11