SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.07G069400

Description hypothetical protein

Gene interval Chr07:6270176–6283087 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G46020:BRM:transcription regulatory protein SNF2

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features303Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records52

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.1716.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

303 matching features · page 14 of 31

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P18019 AH 135Y 291.1104 11.296e-11
P18034 No candidate annotation 276.1936 18.423e-11
P18621 (4Z,6Z)-Octa-4,6-dienoylcarnitine 283.1757 15.76e-11
P18874 Huperzine T 277.1648 11.366e-12
P19202 1-pentadecylglycerone 3-phosphate 380.2270 19.987e-11
P19268 D-Phenylalanine, 4-fluoro-N-(((5-(4-fluorophenyl)-2-benzofuranyl)methoxy)carbonyl)- 451.1169 18.246e-11
P19274 LysoPE(20:5(5Z,8Z,11Z,14Z,17Z)/0:0) 499.2715 14.873e-11
P19344 Methyl 6-(4-isopropyl-4-methyl-5-oxo-2-imidazolin-2-yl)-m-toluate 288.1458 13.309e-11
P19420 Homoneoharringtonine 549.2405 11.328e-11
P19653 No candidate annotation 750.2553 16.363e-12