SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G317100

Description hypothetical protein

Gene interval Chr06:50586679–50589765 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G61520:AT5G61520:Major facilitator superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features876Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records45

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0514.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

876 matching features · page 19 of 88

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P09738 Gelsemicine 358.1880 14.654e-14
P09859 2-Amino-5-phenylpyridine 170.0831 14.364e-11
P09866 L-Histidine 155.0691 16.808e-11
P09906 No candidate annotation 259.1479 11.008e-11
P09940 Serdexmethylphenidate 499.1991 16.071e-12
P09957 Hyperin 2''-[glucosyl-(1->3)-rhamnoside] 6''-rhamnoside 918.2680 18.076e-11
P10010 Wilfordine 883.2744 13.556e-12
P10026 Luteolin 3'-methyl ether 7-glucuronide-4'-rhamnoside 622.1508 11.485e-11
P10046 No candidate annotation 813.2691 17.125e-12
P10074 Tamoxifen-N-glucuronide 547.2601 18.411e-12