SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G305700

Description hypothetical protein

Gene interval Chr06:49451501–49461369 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G05710:ACO3:aconitase 3

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1299Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records1289

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 3.0062.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1299 matching features · page 26 of 130

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P09434 2-(3,4-Dihydro-2,2-dimethyl-6-nitro-2H-1,4-benzoxazin-4-yl)pyridine N-oxide 301.1057 34.968e-12
P09468 Dehydrosaulatine 395.1336 32.981e-12
P09522 1-Sinapoyl-2,2'-diferuloylgentiobiose 900.2729 37.062e-11
P09654 2-Hydroxyfelbamate 254.0901 31.364e-13
P09661 1-Hydroxyibuprofen 222.1228 31.914e-14
P09690 5,7,3',4',5'-Pentahydroxyflavanone 304.0558 39.07e-11
P09747 1-(4-Acetyl-2-pyrrolidin-1-ylmethyl-piperazin-1-yl)-2-(3,4-dichloro-phenyl)-ethanone 397.1338 31.097e-11
P09793 Butanoic acid, 3-((2-naphthalenylsulfonyl)amino)-4-oxo-4-((2-phenylethyl)amino)-, (S)- 426.1184 35.919e-12
P09863 8-Methylquinoline 143.0717 38.193e-11
P09866 L-Histidine 155.0691 31.193e-12