SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.06G305700

Description hypothetical protein

Gene interval Chr06:49451501–49461369 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G05710:ACO3:aconitase 3

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features1299Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records1289

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 3.0062.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

1299 matching features · page 20 of 130

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P06981 No candidate annotation 135.0636 32.877e-11
P07063 Suffruticoside E 622.2095 33.244e-11
P07089 O-Methylisoalangiside 519.2054 32.981e-11
P07174 dehydro-beta-Ionone 190.1359 34.983e-13
P07213 Boc-L-cysteine 221.0741 32.083e-11
P07338 Cedpht 304.1446 39.685e-12
P07347 Coumanolignan 318.1268 33.26e-11
P07366 O-Phospho-L-serine 185.0125 35.604e-12
P07539 Quercetin 3-(6''-ethylglucuronide) 506.1114 37.788e-11
P07584 Xanthopappin A 172.0347 34.337e-12