SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G219200

Description hypothetical protein

Gene interval Chr05:39875137–39879113 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features782Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

782 matching features · page 56 of 79

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P38150 PIP(22:3(10Z,13Z,16Z)/5-iso PGF2VI) 1052.5236 11.554e-11
P38174 Azaspiracid 13 859.4835 15.285e-12
P38338 (3E,5Z)-1,3,5-Heptatriene 94.0776 17.997e-12
P38451 Slaframine 198.1376 11.911e-12
P38521 xi-5-Isopropyl-2(5H)-furanone 126.0669 11.247e-14
P38526 No candidate annotation 509.1856 14.108e-11
P38571 Madecassoside 974.5044 17.441e-11
P38578 3-Methyl-4-(2,6,6-trimethyl-2-cyclohexen-1-yl)-3-buten-2-one 206.1653 15.046e-13
P38605 Meehanine H 825.4253 15.823e-12
P38636 No candidate annotation 90.0465 13.325e-15