SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G149900

Description hypothetical protein

Gene interval Chr05:34389242–34393621 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features781Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records217

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2778.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

781 matching features · page 3 of 79

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P07307 No candidate annotation 409.1806 26.036e-12
P07500 Diaveridine 260.1291 29.632e-12
P07629 No candidate annotation 741.0583 23.97e-11
P07658 No candidate annotation 872.1575 26.328e-13
P07748 Bocconoline 379.1471 29.264e-11
P08297 Asparenomycin A 340.0759 21.609e-15
P08763 No candidate annotation 831.2168 21.226e-12
P09386 2-Methyl-5-vinylpyrazine 120.0674 23.415e-12
P09432 Metronidazole benzoate 275.0895 25.993e-12
P09899 Stephasubimine 574.2117 27.861e-14