SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 69 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P11102 Cyclohexene 82.0774 19.232e-12
P11108 6-Methoxy-4-methylquinoline 173.0822 12.712e-13
P11109 gamma-Secretase Inhibitor XXI 490.1790 16.17e-11
P11117 No candidate annotation 431.7028 16.61e-14
P11144 2-Amino-2-methylpropanoate 103.0632 13.093e-13
P11160 EXP 3174 436.1399 11.339e-12
P11169 Benthiavalicarb isopropyl 381.1532 11.394e-13
P11175 No candidate annotation 887.2719 18.954e-11
P11178 No candidate annotation 709.2161 13.149e-17
P11188 Apigenin 7-(2''-acetyl-6''-methylglucuronide) 502.1084 13.286e-11