SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 4 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00356 Pyrimido[5,4-d]pyrimidine 132.0436 11.328e-12
P00363 Stizolobinate 227.0410 14.885e-13
P00412 2-Amino-2-methylpropanoate 103.0624 16.774e-13
P00476 Daphnodorin M 542.1208 12.485e-13
P00482 HC Blue No.1 255.1197 19.773e-13
P00499 1-Pentanesulfonic acid 152.0504 18.916e-12
P00511 4-Iodo-2,5-dimethoxyphenethylamine 307.0092 19.338e-14
P00520 L-Threonine 119.0575 19.086e-12
P00572 No candidate annotation 138.9972 12.222e-12
P00636 No candidate annotation 157.9538 14.411e-11