SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 341 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P50293 LysoPC(22:2(13Z,16Z)/0:0) 575.3990 11.201e-11
P50349 (-)-Annonaine 265.1128 11.36e-12
P50351 Nitrarine 307.2073 13.28e-11
P50354 Nodulisporic acid C2 701.4348 11.043e-13
P50359 Decarbamoylneosaxitoxin 272.1221 11.531e-12
P50391 Rubescensin M 682.4118 13.021e-11
P50427 Cytochalasin Qpho 469.2820 11.568e-11
P50429 Fortimicin A 405.2553 11.135e-11
P50454 No candidate annotation 487.3460 15.224e-12
P50455 Carrageenan, potassium salt of 347.2545 11.152e-11