SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 214 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P31019 Blepharocalyxin D 592.2828 17.764e-19
P31057 Rigidiusculamide A 251.1195 19.551e-11
P31058 (4Z)-Tetradec-4-enedioylcarnitine 399.2575 12.856e-11
P31072 Arginyltryptophan 360.1914 11.522e-15
P31077 Fumonisin FP3 783.3958 13.653e-12
P31093 N-Pyrrolidino etonitazene 394.2039 15.429e-12
P31108 No candidate annotation 369.7005 17.452e-12
P31114 No candidate annotation 336.6611 11.17e-11
P31132 Amritoside B 588.2399 11.516e-12
P31137 No candidate annotation 898.3643 11.142e-11