SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 165 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P23667 No candidate annotation 850.2608 16.28e-13
P23669 3-Oxopentanoylcarnitine 259.1408 18.707e-14
P23693 5-hydroxy-hexanal 116.0817 13.994e-11
P23718 No candidate annotation 811.2341 12.075e-16
P23722 Echinacoside 786.2716 12.943e-12
P23732 Eruberin B 640.2438 11.839e-12
P23768 Enacyloxin IIIa 669.2951 18.03e-12
P23819 1,2-di-(2E,4E-hexadienoyl)-sn-glycero-3-phosphocholine 445.1866 14.16e-13
P23823 Tubastrindole G 509.2142 12.952e-12
P23825 Mitrasulgynine 476.1644 11.901e-14