Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P23768

Metabolite ID
P23768
Deionized mass
669.2951 Da
Average m/z
670.3003
Average RT
14.2094
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
75
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

75 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)4.165e-11
Glyma.15G140700 hypothetical protein NA 3Chr15:11520847–11522863 (-)3.415e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)3.825e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 2Chr08:9198213–9201688 (-)1.119e-18
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)7.878e-13
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.871e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 2Chr11:4849799–4851673 (+)4.55e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)7.045e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.701e-15
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.701e-15
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.669e-12
Glyma.15G263500 hypothetical protein AT1G79440:ALDH5F1:aldehyde dehydrogenase 5F1 2Chr15:49664672–49682418 (+)2.051e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)3.986e-12
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)1.115e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)5.367e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)5.367e-13
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)1.737e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.619e-13
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)2.852e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)8.03e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)6.276e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)6.276e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)6.276e-12
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)1.689e-12
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)7.758e-13
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)7.758e-13
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)5.994e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.576e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)6.077e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)6.077e-12
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)6.109e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.804e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.871e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.871e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.871e-12
Glyma.09G057300 hypothetical protein AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein 1Chr09:5164998–5171598 (-)6.163e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.806e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)8.569e-12
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 1Chr09:41217358–41221592 (-)2.239e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)2.315e-12
Glyma.10G274200 hypothetical protein NA 1Chr10:49704427–49706416 (+)9.68e-11
Glyma.10G274300 COL22 AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein__AT1G68520:BBX14:B-box type zinc fing… 1Chr10:49716241–49718424 (-)9.68e-11
Glyma.11G061800 hypothetical protein NA 1Chr11:4632831–4633552 (+)7.253e-13
Glyma.11G062400 hypothetical protein AT4G36860:AT4G36860:LIM domain-containing protein 1Chr11:4720040–4726569 (+)2.44e-12
Glyma.11G064500 hypothetical protein AT4G36760:APP1:aminopeptidase P1 1Chr11:4870744–4877710 (-)2.67e-11
Glyma.11G064600 hypothetical protein AT4G36760:APP1:aminopeptidase P1 1Chr11:4882718–4886331 (-)2.67e-11
Glyma.11G065000 hypothetical protein AT4G36730:GBF1:G-box binding factor 1 1Chr11:4916855–4922192 (+)2.672e-12
Glyma.11G065500 hypothetical protein AT1G28350:AT1G28350:Nucleotidylyl transferase superfamily protein__AT2G33840:AT2G33840:Tyrosyl-tRNA synthetase, class I… 1Chr11:4945511–4948952 (-)9.167e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.078e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.078e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)3.804e-12
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)7.045e-14
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.905e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.905e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.701e-15
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)6.455e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)5.077e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)4.871e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)9.784e-11
Glyma.15G140900 hypothetical protein AT3G66658:ALDH22A1:aldehyde dehydrogenase 22A1 1Chr15:11538070–11545857 (-)2.246e-11
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)2.944e-11
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)4.792e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.228e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.84e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)5.58e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.292e-12
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)2.219e-15
Glyma.16G189000 hypothetical protein NA 1Chr16:35160485–35167548 (-)1.969e-13
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)6.116e-13
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)7.333e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)7.333e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)3.825e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.253e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.253e-11
Glyma.19G138700 hypothetical protein AT2G41740:VLN2:villin 2 1Chr19:40010487–40023584 (-)2.291e-11