SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 139 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P20071 Melochinone 331.1571 13.184e-11
P20094 No candidate annotation 632.1331 16.7e-11
P20132 Thymidine 3',5'-cyclic monophosphate 304.0457 13.727e-12
P20135 No candidate annotation 610.9637 16.109e-17
P20138 Antibiotic KA 7367B 200.1542 11.772e-12
P20147 Shoreaphenol 466.0991 15.142e-12
P20156 Trichodenone A 124.0522 16.245e-14
P20165 (+)-Cheimonophyllal 282.1437 14.669e-15
P20196 Quinomycin B0 1112.3986 12.874e-13
P20202 Dinklagin C 354.1090 11.944e-11