SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G127500

Description hypothetical protein

Gene interval Chr05:32041345–32049554 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features3663Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records8

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0022.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

3663 matching features · page 108 of 367

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P15548 1-Cinnamoyl-3-acetyl-11-hydroxymeliacarpin 724.2653 12.109e-15
P15557 Naphthomycin J 832.3244 11.742e-16
P15561 WS75624B 380.1410 12.289e-11
P15566 1-(2,4,6-Trimethylphenoxy)propan-2-amine 193.1459 14.25e-12
P15567 Juncin B 526.1978 12.81e-12
P15582 No candidate annotation 853.3764 11.167e-15
P15603 Coenzyme F420-1 644.1384 15.189e-11
P15609 2-Isopropylfuran 110.0718 14.208e-16
P15627 6-Methyl-3,5-heptadien-2-one 124.0875 13.947e-13
P15635 4-Aminophenylacetic acid 151.0649 17.481e-16