Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15561

Metabolite ID
P15561
Deionized mass
380.1410 Da
Average m/z
381.1500
Average RT
12.0354
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
54
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

54 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)2.379e-12
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)4.81e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.828e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.828e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.166e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)6.668e-11
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)5.629e-11
Glyma.16G200500 hypothetical protein AT5G51840:AT5G51840:junctophilin-like protein 2Chr16:36163525–36167913 (-)2.963e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.598e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.598e-12
Glyma.01G170700 hypothetical protein NA 1Chr01:50793927–50800725 (-)4.689e-11
Glyma.01G175500 hypothetical protein AT3G50660:DWF4:Cytochrome P450 superfamily protein 1Chr01:51219681–51224948 (+)3.994e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.337e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)5.772e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.289e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.217e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.217e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.217e-11
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)4.963e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)6.469e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)9.922e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.336e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)8.11e-11
Glyma.06G293300 hypothetical protein AT4G28280:LLG3:LORELEI-LIKE-GPI ANCHORED PROTEIN 3 1Chr06:48198132–48201464 (-)9.423e-15
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)1.652e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.143e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.487e-11
Glyma.09G110000 hypothetical protein NA 1Chr09:21593730–21602127 (+)4.974e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)5.662e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.608e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.06e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.06e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)6.175e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)3.951e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)3.951e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.828e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)6.668e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)5.422e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.071e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.974e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.11e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.48e-16
Glyma.16G200400 hypothetical protein NA 1Chr16:36151273–36155406 (+)2.963e-11
Glyma.16G200600 hypothetical protein AT5G51830:AT5G51830:pfkB-like carbohydrate kinase family protein 1Chr16:36173339–36177658 (-)2.963e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.106e-11
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)4.81e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.486e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.486e-12
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)2.176e-14
Glyma.18G213300 hypothetical protein AT5G43180:AT5G43180:transmembrane protein, putative (Protein of unknown function, DUF599) 1Chr18:50026808–50028261 (-)3.178e-11
Glyma.18G213400 hypothetical protein NA 1Chr18:50037003–50043647 (+)3.178e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.275e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.275e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)5.155e-11