SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G126400

Description hypothetical protein

Gene interval Chr05:31961493–31968339 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features862Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

862 matching features · page 67 of 87

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P41608 PIP(22:2(13Z,16Z)/TXB2) 1084.5529 12.459e-11
P41617 Hexahomomethionine 233.1468 12.853e-12
P41628 Cortolone-3-glucuronide 542.2743 12.508e-13
P41665 (-)-CP 263,114 552.2353 16.085e-11
P41823 No candidate annotation 1137.5467 12.597e-11
P41966 4-[2-Acetylamino-2-(1-biphenyl-4-ylmethyl-2-oxo-azepan-3-ylcarbamoyl)-ethyl]-2-formyl-benzoic acid 555.2374 14.77e-12
P41970 N-Methylheteropsine 554.2240 11.615e-12
P42062 (2S,3R)-3-Butan-2-yl-N-hydroxy-N'-[(2S)-1-(methylamino)-1-oxo-3-phenylpropan-2-yl]-2-prop-2-enylbutanediamide 389.2259 11.552e-11
P42115 Tarasaponin IV 1088.5304 11.46e-11
P42119 No candidate annotation 921.9813 18.371e-14