SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G124700

Description hypothetical protein

Gene interval Chr05:31807311–31817648 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2364Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0013.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2364 matching features · page 49 of 237

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P11717 No candidate annotation 120.0197 11.061e-13
P11721 5-(4-Carboxybutylperoxy)pentanoic acid 234.1087 11.875e-13
P11723 Isomagnolol 266.1356 12.402e-11
P11735 Okaramine M 482.2333 14.765e-11
P11757 No candidate annotation 227.1591 12.13e-13
P11762 (S)-ATPA 228.1093 18.778e-11
P11794 Okaramine A 520.2462 11.552e-13
P11856 No candidate annotation 813.2365 15.403e-11
P11869 Sterequinone D 304.1081 16.241e-12
P11879 Corydine 341.1680 13.523e-15