SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G124700

Description hypothetical protein

Gene interval Chr05:31807311–31817648 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2364Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0013.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2364 matching features · page 228 of 237

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52310 Rotalin A 288.2418 14.073e-13
P52342 1,2-di-(6Z,9Z,12Z,15Z-octadecatetraenoyl)-sn-glycero-3-phospho-(1'-sn-glycerol) 762.4424 18.251e-13
P52344 1,2-Dihydro-1,6,6-trimethylnaphthalene 172.1228 15.112e-11
P52380 (3E,5Z)-1,3,5-Heptatriene 94.0770 12.362e-11
P52411 No candidate annotation 558.8479 11.921e-11
P52466 N-Dodecyl-N,N-dimethyl-3-ammonio-1-propanesulfonate 335.2516 11.1e-11
P52502 3alpha,20alpha,21-Trihydroxy-5beta-pregnan-11-one 350.2453 15.166e-11
P52519 Glyinflanin J 390.1798 12.487e-13
P52535 Dehydromonocrotaline 323.1351 11.132e-12
P52537 Mycotoxin T 2 341.1479 16.155e-14