SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G124700

Description hypothetical protein

Gene interval Chr05:31807311–31817648 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2364Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0013.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2364 matching features · page 21 of 237

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P05765 Lycomarasmine B 277.0881 15.496e-14
P05782 N-Hydroxyannomontine 277.0960 18.255e-12
P05826 Kopsinitarine A 422.1470 16.558e-12
P05831 2-Methacryloyloxyethyl phosphorylcholine 295.1190 11.645e-11
P05856 Midodrine 254.1227 18.652e-13
P05981 Dikegulac 274.1054 11.155e-11
P06002 Nordracorubin 474.1461 11.653e-11
P06024 N-(3-oxo-dodecanoyl)-homoserine thiolactone 313.1697 11.312e-11
P06027 Lachnanthocarpone 288.0816 14.938e-11
P06036 (+)-SQ 26517 143.0566 17.528e-11