SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G124700

Description hypothetical protein

Gene interval Chr05:31807311–31817648 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features2364Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records3

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0013.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

2364 matching features · page 18 of 237

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P05120 (Z,E,E,E)-5-(2,4,6-Tetradecatriene-8,10-diynylidene)-2(5H)-furanone 264.1146 14.86e-11
P05139 No candidate annotation 310.6259 11.466e-12
P05142 p-Hydroxyphenylacetylglycine 209.0658 17.821e-12
P05168 Jadomycin A 419.1388 13.349e-11
P05182 5a,11a-Dehydrooxytetracycline 458.1309 14.394e-17
P05293 Ciglitazone 333.1385 16.076e-11
P05350 Methylinoscavin B 450.1344 14.585e-14
P05365 Histidyltryptophan 341.1529 12.727e-13
P05370 9-(4-Hydroxyphenyl)-2-methoxy-1H-phenalen-1-one 302.0934 13.828e-14
P05400 Europine N-oxide 345.1800 18.291e-11