SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G034000

Description hypothetical protein

Gene interval Chr05:2965889–2971412 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G03400:DFL2:Auxin-responsive GH3 family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features666Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records43

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0646.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

666 matching features · page 56 of 67

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P42906 No candidate annotation 965.0180 18.444e-11
P42908 No candidate annotation 1047.0463 15.731e-12
P42963 PIP(PGF1alpha/22:5(7Z,10Z,13Z,16Z,19Z)) 1064.5277 16.219e-11
P43004 No candidate annotation 889.4915 11.387e-11
P43007 No candidate annotation 407.3600 13.056e-12
P43087 LysoPE(0:0/20:3(8Z,11Z,14Z)) 503.2959 11.399e-11
P43147 Avermectin A2b monosaccharide 746.4252 15.893e-12
P43202 3R-undecanoyloxy-2R-hydroxy-4-methylpentanoic acid methyl ester 330.2375 12.994e-11
P43362 Metominostrobin 284.1151 14.564e-11
P43375 PA(10:0/PGE2) 660.3651 14.155e-11