SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.05G034000

Description hypothetical protein

Gene interval Chr05:2965889–2971412 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G03400:DFL2:Auxin-responsive GH3 family protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features666Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records43

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0646.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

666 matching features · page 29 of 67

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P17449 Malonylshisonin 842.2068 14.942e-13
P17485 No candidate annotation 728.2704 13.776e-11
P17618 Isopropyl phenylacetate 178.0981 11.353e-12
P17761 No candidate annotation 1092.3532 15.818e-12
P17776 2'-Dehydrokanamycin A 482.2226 11.548e-11
P17883 No candidate annotation 587.8008 11.752e-11
P18035 N-[2-(3,5-Dioxopiperazino)propyl]-N-(2-amino-2-oxoethyl)glycine 286.1288 15.859e-11
P18452 No candidate annotation 409.1206 15.767e-11
P18469 No candidate annotation 784.2949 12.106e-11
P18597 LysoPA(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0) 482.2431 11.029e-12