SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G124600

Description hypothetical protein

Gene interval Chr04:16329983–16332898 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features70Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records2

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0286.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

70 matching features · page 2 of 7

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P07575 Resorcinol 110.0351 11.921e-11
P08081 Bendamustine 357.1035 19.298e-11
P08268 No candidate annotation 264.6586 16.275e-11
P10151 Amodiaquine 355.1444 11.897e-11
P10274 2'-Methyl-4'-(5-methyl-(1,2,4)-oxadiazol-3-yl)biphenyl-4-carboxylic acid (4-methoxy-3-(4-methylpiperazin-1-yl)phenyl)amide 497.2424 16.81e-11
P11636 Benzomalvin C 395.1307 14.476e-11
P12648 Losmapimod 383.2008 19.275e-11
P13530 2-Benzyl-3-nitropyridine 214.0724 17.205e-11
P13826 Esmeraldic acid 518.1596 18.125e-11
P15222 1,4-Divinylbenzene 130.0774 12.942e-11