SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G116900

Description hypothetical protein

Gene interval Chr04:13696275–13700803 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features754Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

754 matching features · page 9 of 76

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P05900 [1R-(1alpha,4alpha,4aalpha,7beta,8abeta)]-4-Bromo-7-chlorodecahydro-1,4a-dimethyl-7-(1-methylethyl)-1-naphthalenol 336.0899 12.696e-11
P05905 Nitrobenzylmercaptopurine 287.0454 15.934e-12
P06019 4-Amino-4-deoxychorismate 225.0627 11.113e-13
P06071 Proteacin 473.1514 14.464e-11
P06146 4-Formylsalicylic acid 166.0251 11.174e-12
P06218 Repaglinide 452.2673 15.733e-13
P06259 No candidate annotation 150.0611 12.168e-11
P06337 Furo[3,2-c]pyran-4-one 136.0153 11.007e-11
P06434 Eupaglehnin F 400.1272 11.25e-12
P06475 (+)-5,17-Dehydromatrine N-oxide 262.1661 18.579e-11