SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G104400

Description hypothetical protein

Gene interval Chr04:9885009–9889282 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features643Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

643 matching features · page 3 of 65

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01816 9H-Purine-9-ol 136.0401 11.101e-11
P02104 Methyl (Z)-5-(5-methyl-2-thienyl)-2-penten-4-ynoate 206.0407 13.022e-13
P02335 Chloroxine 212.9710 16.347e-12
P02489 N5-Acetylornithine 174.1012 19.044e-11
P02660 3-(4-Deoxy-beta-D-gluc-4-enuronosyl)-N-acetyl-D-glucosamine 379.1131 14.842e-11
P02804 No candidate annotation 242.9603 11.458e-11
P03104 No candidate annotation 192.1222 12.206e-11
P03342 D-Alanyl-alanyl-poly(glycerolphosphate) 314.0858 15.096e-11
P03376 1,3-Bis(tetrahydro-2-furanyl)-5-fluoro-2,4-pyrimidinedione 270.1016 17.776e-11
P03397 Tripterygiumine K 783.2600 13.044e-13