SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G084800

Description hypothetical protein

Gene interval Chr04:7187985–7192897 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G11630:NOXY2:uncharacterized protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features836Overlap
Maximum supporting SNP records5
Features with ≥2 supporting SNP records518

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.6555.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

836 matching features · page 62 of 84

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P16416 2-Ethyl-5,7-dimethyl-3-[4-[2-(2H-tetrazol-5-yl)phenyl]phenyl]imidazo[4,5-b]pyridine 395.1892 14.115e-11
P16432 1H-Pyrrole-2,5-dione, 1-[4-(2-benzoxazolyl)phenyl]- 290.0692 15.029e-11
P16545 Sulfisomidine 278.0841 15.689e-11
P16570 N-[(1S)-1-(Ethoxycarbonyl)-3-phenylpropyl]-L-alanyl-L-proline 3-nitrooxypropyl ester 479.2301 16.364e-11
P16579 N1,N5,N10-Triferuloyl spermidine 673.2926 11.047e-12
P16596 Hemiphroside A 668.2303 14.459e-11
P16647 Loquatoside 438.1138 19.047e-11
P16650 Metazachlor 277.1012 19.828e-11
P17040 L-Arginine phosphate 254.0761 18.941e-11
P17151 3,4-Dihydroxyphenylethanol-4-diglucoside 478.1685 14.998e-11