SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G084800

Description hypothetical protein

Gene interval Chr04:7187985–7192897 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G11630:NOXY2:uncharacterized protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features836Overlap
Maximum supporting SNP records5
Features with ≥2 supporting SNP records518

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.6555.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

836 matching features · page 16 of 84

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P13822 Euchrenone b5 450.1633 22.829e-11
P13838 No candidate annotation 845.2300 26.623e-12
P13876 Tropate 166.0646 22.628e-11
P13878 5-Methoxy-3,4-methylenedioxyamphetamine 209.1074 21.855e-11
P13894 Meso-Tetra(4-carboxyphenyl)porphine 790.1962 25.831e-13
P13988 No candidate annotation 487.0966 21.749e-13
P13994 2-Methyl-1-hydroxypropyl-ThPP 496.0955 28.996e-12
P14186 No candidate annotation 844.2205 23.228e-12
P14315 Minwanensin 284.1580 22.194e-12
P14424 Pyridin-2-ylmethyl N-[(2S)-1-[[(2S,4S,5S)-4-hydroxy-1,6-diphenyl-5-(1,3-thiazol-5-ylmethoxycarbonylamino)hexan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]carbamate 659.2774 21.753e-11