Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P13876

Metabolite ID
P13876
Deionized mass
166.0646 Da
Average m/z
167.0717
Average RT
11.5903
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
50
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

50 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G313500 hypothetical protein NA 3Chr06:50191600–50203098 (-)1.146e-13
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)2.628e-11
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)1.718e-11
Glyma.06G209300 hypothetical protein NA 2Chr06:20573671–20581076 (-)9.218e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr06:50401945–50408153 (+)4.9e-13
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.695e-13
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)3.631e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)9.232e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.622e-12
Glyma.04G192000 hypothetical protein AT3G48430:REF6:relative of early flowering 6 1Chr04:46279239–46297477 (-)5.572e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.676e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.701e-13
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)3.494e-11
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)3.494e-11
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)3.494e-11
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)3.494e-11
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)3.494e-11
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)3.494e-11
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)3.494e-11
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)3.494e-11
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)3.494e-11
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)3.494e-11
Glyma.06G316500 hypothetical protein AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein 1Chr06:50531222–50538652 (-)6.321e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)7.635e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)3.718e-11
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)7.829e-13
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.695e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.695e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.695e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.695e-13
Glyma.08G183500 SWEET24 sugar efflux transporter SWEET24 AT5G13170:SAG29:senescence-associated 29 1Chr08:14724384–14726579 (+)5.917e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)6.347e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)1.495e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)3.237e-11
Glyma.10G038400 hypothetical protein NA 1Chr10:3400759–3409406 (+)4.381e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.866e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.866e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.866e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.866e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.66e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.855e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)9.151e-13
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)2.715e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.164e-11
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)4.449e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.375e-11
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)5.998e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.487e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.487e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)8.977e-13