SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G084800

Description hypothetical protein

Gene interval Chr04:7187985–7192897 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G11630:NOXY2:uncharacterized protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features836Overlap
Maximum supporting SNP records5
Features with ≥2 supporting SNP records518

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.6555.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

836 matching features · page 10 of 84

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P07352 Benzoxazole 119.0351 22.107e-11
P07405 No candidate annotation 470.9858 22.602e-11
P07425 Maltol 6'-O-beta-D-apiofuranosyl-beta-D-glucopyranoside 420.1274 21.389e-13
P07644 No candidate annotation 585.0574 22.422e-11
P07886 3-Demethylsimmondsin 2'-(Z)-ferulate 537.1879 27.471e-12
P08169 No candidate annotation 943.2957 29.084e-14
P08314 Glabraoside A 598.1588 24.396e-13
P08637 Melrosin A 476.1729 26.788e-12
P08697 No candidate annotation 917.2738 29.642e-12
P08716 3,4-Dehydrothiomorpholine-3-carboxylate 145.0222 23.412e-11