SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G242800

Description hypothetical protein

Gene interval Chr03:44064511–44073939 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G08630:AT4G08630:fas-binding factor-like protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features454Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records117

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2577.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

454 matching features · page 5 of 46

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P23530 S-Isopropyl 3-methylbut-2-enethioate 158.0767 21.819e-13
P23548 (4E)-Undec-4-enoyl-CoA 933.2692 21.178e-11
P24007 N-((Hexahydro-1-azepinyl)carbonyl)-leucyl(1-methyl)-tryptophyl-tryptophan 619.3318 24.57e-12
P25637 trans-p-Ferulyl alcohol 4-O-[6-(2-methyl-3-hydroxypropionyl)] glucopyranoside 428.1667 21.488e-11
P25985 Rhamnazin 3-isorhamninoside 784.2535 21.809e-11
P26379 (2R,3R,5S,6R)-6-(Ethyl)-2-(S-pantetheinyl)-carbapenam-3-carboxylate 459.2038 26.451e-12
P28780 5-(Methoxymethyl)-1H-pyrrole-2-carbaldehyde 139.0624 28.508e-12
P29114 Pyrithiamine 258.1449 29.624e-13
P29660 Artemether 298.1742 22.831e-11
P29865 No candidate annotation 1069.5175 23.36e-11