SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G085900

Description hypothetical protein

Gene interval Chr03:25280967–25285887 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT3G07310:AT3G07310:phosphoserine aminotransferase, putative (DUF760)

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features44Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

44 matching features · page 3 of 5

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P14870 Coumanolignan 318.1225 11.024e-11
P16271 Derrustone 326.0795 12.979e-11
P17340 Sibutramine 279.1747 18.677e-11
P19356 Terazosin 387.1942 16.48e-11
P22389 Hygrophorone B14 340.2569 18.275e-11
P24081 8-(2-[4-(2-Methoxyphenyl)-1-piperazinyl]ethyl)-8-azaspiro[4.5]decane-7,9-dione 385.2352 16.342e-13
P24364 No candidate annotation 691.1191 14.033e-11
P24426 Hept-4-enedioylcarnitine 301.1540 15.512e-11
P27756 Antrafenine 588.1946 17.623e-11
P29045 PGP(TXB2/22:6(4Z,7Z,10Z,13Z,16Z,19Z)) 988.4782 13.04e-12