SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G021600

Description hypothetical protein

Gene interval Chr03:2240686–2246512 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family 704, subfamily A, polypeptide 1

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features588Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records101

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2177.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

588 matching features · page 28 of 59

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P19477 4-Hydroxy-2-oxohexanoic acid 146.0561 17.521e-11
P19549 Difloxacin 399.1411 17.498e-11
P19737 Mangostenone B 462.2017 17.24e-11
P20017 No candidate annotation 343.2428 16.86e-11
P20028 beta-D-Glucopyranosyl anthranilate 299.1011 19.711e-14
P20173 Pinocembrin 7-O-neohesperidoside 3'''-O-acetate 606.2006 15.095e-11
P20273 Gliquidone 527.2084 11.442e-11
P20284 N-[[(5S)-3-(4,6-Dihydropyrrolo[1,2-a][4,1]benzoxazepin-8-yl)-2-oxo-1,3-oxazolidin-5-yl]methyl]acetamide 341.1355 11.331e-12
P20337 Evodone 164.0808 14.026e-11
P20347 Girolline 190.0621 16.13e-11