SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G021600

Description hypothetical protein

Gene interval Chr03:2240686–2246512 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family 704, subfamily A, polypeptide 1

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features588Overlap
Maximum supporting SNP records4
Features with ≥2 supporting SNP records101

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.2177.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

588 matching features · page 16 of 59

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P06434 Eupaglehnin F 400.1272 12.611e-12
P06475 (+)-5,17-Dehydromatrine N-oxide 262.1661 12.384e-12
P06493 No candidate annotation 108.0797 14.293e-12
P06579 4-O-Methylascochlorin 418.1920 16.297e-11
P06762 No candidate annotation 139.0341 12.273e-11
P06804 Linderazulene 210.1049 13.953e-12
P06840 13-Hydroxypalmatine 367.1410 12.957e-11
P06896 (E)-3-Hydroxy-2-(4-oxazolylmethylene)-butanal 167.0574 19.554e-11
P06903 No candidate annotation 259.0544 16.83e-11
P07122 p-Coumaroyl-malic acid 280.0568 19.582e-13