SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G018600

Description hypothetical protein

Gene interval Chr03:1859210–1862572 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G45695:AT2G45695:Ubiquitin related modifier 1

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features641Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

641 matching features · page 62 of 65

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P52044 No candidate annotation 428.2503 12.776e-12
P52185 Reproterol 389.1693 13.801e-11
P52203 Amadannulen 376.2942 15.906e-11
P52404 No candidate annotation 879.3783 13.701e-11
P52519 Glyinflanin J 390.1798 14.939e-13
P52535 Dehydromonocrotaline 323.1351 15.872e-18
P52536 3-Hydroxyisorenieratene 544.3713 18.285e-12
P52537 Mycotoxin T 2 341.1479 12.263e-17
P52735 Cypendazole 329.1478 17.353e-16
P52796 Famprofazone 377.2443 12.809e-12