SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G016700

Description hypothetical protein

Gene interval Chr03:1683395–1688893 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features461Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records17

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0369.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

461 matching features · page 21 of 47

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P21496 Vindoline 456.2251 18.338e-12
P21559 Paulomycin B 772.2261 17.579e-11
P21855 No candidate annotation 814.2560 16.654e-11
P21863 No candidate annotation 1129.3835 13.542e-11
P21913 Eremosulphoxinolide A 464.1861 16.266e-12
P21951 3-O-Isobutyrylkinamycin C 566.1508 13.262e-11
P22190 1,2,3,4-Tetrahydroisoquinolin-1-yl formate 177.0771 11.791e-11
P22382 Diphenylcarbazide 242.1167 11.695e-11
P22523 Taxifolin 3-galactosyl-(1->6)-glucoside 628.1763 19.225e-12
P22731 7',8'-Dihydro-8'-hydroxycitraniaxanthin 488.3297 11.945e-11