SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G016700

Description hypothetical protein

Gene interval Chr03:1683395–1688893 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features461Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records17

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0369.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

461 matching features · page 18 of 47

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P18446 No candidate annotation 1080.3689 18.865e-11
P18499 tyrosine-tyrosinate 344.1377 15.936e-11
P18608 Bursopoietin 339.2017 13.474e-12
P18872 Plagiochin C 454.1801 16.371e-11
P18966 Notoamide H 479.2104 12.144e-11
P18970 Deoxypumiloside 496.1831 13.974e-12
P19172 5-Hydroxydec-8-enedioylcarnitine 359.2012 14.964e-11
P19315 Topisolon 376.2052 16.172e-11
P19799 Galangin 5-methyl ether 284.0690 15.649e-13
P19988 12-hydroxy-3Z,6Z-dodecadienoic acid 212.1400 16.233e-11