SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.02G304000

Description hypothetical protein

Gene interval Chr02:47908136–47915999 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G51350:AT1G51350:ARM repeat superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features264Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0152.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

264 matching features · page 8 of 27

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P14154 Methyltetrahydrofolate 459.1856 11.992e-11
P14335 (+)-Cycleatjehenine 604.2592 11.544e-11
P14345 Levetiracetam 170.1025 18.529e-12
P14406 LysoPE(20:5(5Z,8Z,11Z,14Z,17Z)/0:0) 499.2710 12.142e-11
P14583 Tasumatrol V 600.2263 11.01e-13
P14640 No candidate annotation 527.2632 12.78e-11
P15162 No candidate annotation 923.4530 11.751e-11
P15273 N-(2R-hydroxydocosanoyl)-1-beta-glucosyl-8E-octadecasphingenine 799.6602 13.312e-12
P15346 R-95913 331.1025 17.238e-11
P15383 (7R)-7-(5-Carboxy-5-oxopentanoyl)aminocephalosporinate 414.0740 11.247e-11