SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.02G304000

Description hypothetical protein

Gene interval Chr02:47908136–47915999 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G51350:AT1G51350:ARM repeat superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features264Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0152.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

264 matching features · page 16 of 27

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P30615 No candidate annotation 384.6477 11.451e-11
P30736 4R-Hydroxy solifenacin 378.1945 13.204e-11
P30855 12-Dihydrodalbinol O-glucoside 590.2069 11.145e-11
P31011 Isochamaecynone 202.1347 15.678e-11
P31093 N-Pyrrolidino etonitazene 394.2039 17.529e-12
P31275 Estatin A 391.1823 11.889e-13
P31467 Pseudoaconitine 689.3372 11.942e-11
P31529 PGP(i-12:0/20:5(7Z,9Z,11E,13E,17Z)-3OH(5,6,15)) 840.3955 15.335e-11
P31900 1-tetradecanoyl-glycero-3-phosphoserine 469.2412 15.806e-11
P32274 (3-Methyl-2-butenyl)-benzene 146.1093 13.789e-11