SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G173900

Description hypothetical protein

Gene interval Chr01:51092004–51094319 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features320Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0125.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

320 matching features · page 3 of 32

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P01915 Cardiospermin 275.0986 13.918e-12
P02052 2-Amino-2-methylpropanoate 103.0623 15.238e-11
P02118 N-Isovaleryl-L-homoserine lactone 185.1050 17.237e-11
P02548 No candidate annotation 185.9469 13.09e-11
P02754 TRIBOA 197.0316 12.678e-12
P02768 Falconensin C 524.0996 16.207e-12
P03181 Carisoprodol 260.1717 18.495e-11
P03486 Penethamate 433.2026 17.123e-12
P03717 1,2-Dimethoxy-13-methyl-[1,3]benzodioxolo[5,6-c]phenanthridine 347.1150 12.68e-12
P03834 No candidate annotation 120.0280 13.028e-13