SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Gene Associated metabolites Research resources

GENE DETAIL · Glycine max

Glyma.01G045600

Description hypothetical protein

Gene interval Chr01:5242432–5245038 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features669Overlap

Maximum supporting SNP records3

Features with ≥2 supporting SNP records560

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4738.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

SoyBase ↗Gene models and soybean annotations
NCBI Gene ↗Gene records, sequences and cross-references
UniProt ↗Protein function, domains and annotation evidence
PubMed ↗Publications mentioning this identifier

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

669 matching features · page 45 of 67

Metabolite ID	Candidate annotation	Deionized mass (Da)	Supporting SNP records	Minimum P
P07035	2-Methyl-2H-1,3-benzoxazin-4(3H)-one	163.0630	2	5.008e-11
P07875	Tuberostemospironine	253.1288	2	1.338e-11
P08097	Alaptide	182.1027	2	3.259e-11
P08158	2-[5-[(3,5-Dimethyl-1H-pyrrol-2-yl)methylidene]-4-methoxy-2-pyrrolylidene]indole	317.1528	2	1.346e-11
P08355	5-Carboxypyranocyanidin 3-O-beta-glucopyranoside	516.0895	2	4.08e-11
P08689	N-(1-Deoxy-1-fructosyl)proline	277.1145	2	7.484e-11
P08763	No candidate annotation	831.2168	2	1.276e-11
P09294	2-Methoxybenzoic acid	152.0462	2	1.789e-11
P09373	No candidate annotation	475.2201	2	3.506e-11
P09464	No candidate annotation	245.6533	2	6.866e-11