SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G045600

Description hypothetical protein

Gene interval Chr01:5242432–5245038 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features669Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records560

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4738.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

669 matching features · page 27 of 67

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P29314 No candidate annotation 252.1318 31.333e-12
P29378 No candidate annotation 906.3320 34.994e-11
P29609 3,6-Dimethyl-1,4-dioxane-2,5-dione 144.0418 32.008e-13
P29714 Saframycin C 567.2128 31.21e-11
P29744 Miraziridine A 668.3944 36.031e-16
P29772 Ecadotril 385.1363 39.025e-11
P29799 Chaetoxanthone C 390.0909 38.282e-11
P29805 No candidate annotation 790.1370 37.758e-11
P29825 Macaflavanone C 490.2362 34.916e-13
P29828 4'-Oxonebramine 304.1730 31.439e-12