SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G010200

Description hypothetical protein

Gene interval Chr01:993024–997480 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G32060:PRK:phosphoribulokinase

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features161Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records7

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0435.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

161 matching features · page 13 of 17

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P37047 No candidate annotation 942.1823 14.506e-11
P37063 No candidate annotation 974.1284 14.437e-13
P37498 Ferimzone 254.1525 13.536e-11
P37547 4-Hydroxy-2-oxohexanoic acid 146.0572 12.874e-11
P38067 (2S,3S,4R)-4-(1,3-Benzodioxol-5-yl)-1-[2-(dibutylamino)-2-oxoethyl]-2-(4-methoxyphenyl)pyrrolidine-3-carboxylic acid 510.2693 19.202e-11
P38210 Unguisin A 758.4149 12.607e-11
P38335 PGP(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:2(11Z,14Z)) 926.5044 12.357e-11
P38530 Isouron 211.1290 17.774e-11
P41007 Loperamide oxide 492.2170 11.052e-11
P41048 Cochinchinenene B 512.2184 11.7e-13